Human aquaporin 4 has been studied using molecular dynamics (MD) simulations in the absence and presence of pulses of external static electric fields. The pulses were 10 ns in duration and 0.012–0.065 V/Å in intensity acting along both directions perpendicular to the pores. Water permeability and the dipolar response of all residues of interest (including the selectivity filter) within the pores have been studied. Results showed decreased levels of water osmotic permeability within aquaporin channels during orthogonally-oriented field impulses, although care must be taken with regard to statistical certainty. This can be explained observing enhanced “dipolar flipping” of certain key residues, especially serine 211, histidine 201, arginine 216, histidine 95 and cysteine 178. These residues are placed at the extracellular end of the pore (serine 211, histidine 201, and arginine 216) and at the cytoplasm end (histidine 95 and cysteine 178), with the key role in gating mechanism, hence influencing water permeability.

Human aquaporin 4 gating dynamics under perpendicularly-oriented electric-field impulses: A molecular dynamics study / Marracino, Paolo; Liberti, Micaela; Trapani, Erika; Burnham, Christian J.; Avena, Massimiliano; Garate, José Antonio; Apollonio, Francesca; English, Niall J.. - In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. - ISSN 1661-6596. - ELETTRONICO. - 17:7(2016). [10.3390/ijms17071133]

Human aquaporin 4 gating dynamics under perpendicularly-oriented electric-field impulses: A molecular dynamics study

MARRACINO, PAOLO;LIBERTI, Micaela;APOLLONIO, Francesca;
2016

Abstract

Human aquaporin 4 has been studied using molecular dynamics (MD) simulations in the absence and presence of pulses of external static electric fields. The pulses were 10 ns in duration and 0.012–0.065 V/Å in intensity acting along both directions perpendicular to the pores. Water permeability and the dipolar response of all residues of interest (including the selectivity filter) within the pores have been studied. Results showed decreased levels of water osmotic permeability within aquaporin channels during orthogonally-oriented field impulses, although care must be taken with regard to statistical certainty. This can be explained observing enhanced “dipolar flipping” of certain key residues, especially serine 211, histidine 201, arginine 216, histidine 95 and cysteine 178. These residues are placed at the extracellular end of the pore (serine 211, histidine 201, and arginine 216) and at the cytoplasm end (histidine 95 and cysteine 178), with the key role in gating mechanism, hence influencing water permeability.
2016
Aquaporin; electric field; molecular dynamics; permeability; water; Physical and Theoretical Chemistry; organic chemistry; spectroscopy; inorganic chemistry; catalysis; molecular biology
01 Pubblicazione su rivista::01a Articolo in rivista
Human aquaporin 4 gating dynamics under perpendicularly-oriented electric-field impulses: A molecular dynamics study / Marracino, Paolo; Liberti, Micaela; Trapani, Erika; Burnham, Christian J.; Avena, Massimiliano; Garate, José Antonio; Apollonio, Francesca; English, Niall J.. - In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. - ISSN 1661-6596. - ELETTRONICO. - 17:7(2016). [10.3390/ijms17071133]
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/907479
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